PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW23738.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 201aa    MW: 21752.7 Da    PI: 7.7728
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW23738.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260123.51.1e-3881091101
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkCa+dCv+apyf +eq + +fa++hk+FGasn +kll ++p+ +r +a+ +++yeA+ar+rdPvyG+vg+i++lqqq+++l+ +l l+k
  RWW23738.1   8 PCGACKFLRRKCASDCVFAPYFSSEQgAVRFAAIHKVFGASNASKLLLHVPQADRCEAAVAIAYEAQARLRDPVYGCVGHIFALQQQVATLQLQLMLIK 106
                 7***********************9989*******************************************************************9998 PP

      DUF260  99 eel 101
                 +++
  RWW23738.1 107 AQI 109
                 875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MASGTGSPCG ACKFLRRKCA SDCVFAPYFS SEQGAVRFAA IHKVFGASNA SKLLLHVPQA  60
DRCEAAVAIA YEAQARLRDP VYGCVGHIFA LQQQVATLQL QLMLIKAQIA QRLVTSQPSG  120
SQWQGNDDGN PFLQPCSSWE SMSSSQSSLN FINQDSNRLL PKHDAVLKED LFVGGSSSKM  180
WVTHAEPGEL QDLAFRMAGS L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42430.14e-47LBD family protein