PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW23739.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 234aa    MW: 25467.1 Da    PI: 8.4296
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW23739.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260123.21.4e-3871071100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+++Cv+ap+f++e+ +++f ++hk+FGasnv+kll +lp+ +r++a+ ++ yeA+ar+ dPvyG+v++i++lq+q+  l+a+la+lk
  RWW23739.1   7 PCGACKFLRRKCVSGCVFAPHFCHEKgAAHFVAIHKVFGASNVSKLLMHLPPADRSEAVVTISYEAQARILDPVYGCVAHIFALQRQVVLLQAQLASLK 105
                 7***********************9989********************************************************************999 PP

      DUF260  99 ee 100
                 ++
  RWW23739.1 106 AQ 107
                 87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MAGCGSPCGA CKFLRRKCVS GCVFAPHFCH EKGAAHFVAI HKVFGASNVS KLLMHLPPAD  60
RSEAVVTISY EAQARILDPV YGCVAHIFAL QRQVVLLQAQ LASLKAQARL ALGNGTTSPG  120
EGIAPPTLAS NLSTNHWLAD SNSCRSSHDC NSHFAMVFRI QSEDAPRSMA SLDVQAGPWR  180
SSSSSSSYTD VEGLLSVAFA YPGRSFIRMQ IHYWMPHHCP FPIIDMHSFS YTRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42440.12e-47LBD family protein