PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW23828.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 301aa MW: 34536.6 Da PI: 6.868

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW23828.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.3	8.4e-19	42	89	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd+ll ++v ++G g+W++ ar+ g++Rt+k+c++rw++yl RWW23828.1 42 KGSWTVEEDLLLMNYVSEHGEGRWDSLAREAGLKRTGKSCRLRWLNYL 89 799*******************************************97 PP
2	Myb_DNA-binding	30.6	7.7e-10	121	144	22	46
T-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqk 46 ++W++Ia++++ gRt++++k++w++ RWW23828.1 121 RRWSKIAQHLP-GRTDNEIKNYWRT 144 47*******.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MHRTSPVPVI YSSNSIRARF QYTQVMEFNG RARGEDEVEL KKGSWTVEED LLLMNYVSEH 60 GEGRWDSLAR EAGLKRTGKS CRLRWLNYLR PDLRPAVFTG SPDNHVFPLS LVLNRAPWLS 120 RRWSKIAQHL PGRTDNEIKN YWRTRVQKHA KQLRCEVDSK RFKDVVRHLW IPRLVERIRA 180 ASGSSAVSTH QSVNDPSACK RPEEGDVEFG EAKIASPESS NMVRSSSESS EVQVSTASVS 240 DRFTNCDDAW FQETTGFSAC WPETLPSPGA CDSWGWSMDL DQSGWEENLW SMEDIWLQQQ 300 I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G48000.1	3e-63	MYB family protein