PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW23831.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 473aa MW: 51527.5 Da PI: 7.5234

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW23831.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.6	6.8e-11	249	291	7	54
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++E++RR+r+ ++fe L++l+P++ +K++ a+i+ ++eYI++L RWW23831.1 249 KNEKQRRERLGKKFEDLKSLIPNS-----TKPDRASIVADTIEYINEL 291 58*******************9.....9*************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MAVKVVGHEV AAIRKIVPPG RGPHRGRERE ALVGPVREAE GNLSNKPVAF GSHGRGGVGA 60 AGAFGGSSHT ATACYPDLPL VGDNKGNNSS DLEEKMRLPG FSHDDQTIND ASMGLELDLH 120 HQFDLEPKQE ISTHLMQAGS YPQCFDPATL SYSAAFGMPA DVFFAELPPD GLYDPAVHYG 180 PSNPPFMVRE VIGSFPHAAG FFAAGSRGSG ESYVIGTEDG HGGQLLESPH VRNKRQQGAP 240 WGMKQGGLKN EKQRRERLGK KFEDLKSLIP NSTKPDRASI VADTIEYINE LLRTVDELKI 300 LVDKKRRWRE RARKTATGDQ AAGDMESSSI TPPMDDADRA SKGVLRSSWL QRRSKDTFVD 360 VRIVDDEANI KLTRRKMMNC LLIVAKVLDE LHLELLHLSG GNVGYSHIFM INTKVSVTLS 420 QVLSMPSSRV SGLTKDKLVL LQIHEGSSVY ASAIAKKLIE AMDMSDPTLP ASF

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MAVKVVGHEV AAIRKIVPPG RGPHRGRERE ALVGPVREAE GNLSNKPVAF GSHGRGGVGA  60
AGAFGGSSHT ATACYPDLPL VGDNKGNNSS DLEEKMRLPG FSHDDQTIND ASMGLELDLH  120
HQFDLEPKQE ISTHLMQAGS YPQCFDPATL SYSAAFGMPA DVFFAELPPD GLYDPAVHYG  180
PSNPPFMVRE VIGSFPHAAG FFAAGSRGSG ESYVIGTEDG HGGQLLESPH VRNKRQQGAP  240
WGMKQGGLKN EKQRRERLGK KFEDLKSLIP NSTKPDRASI VADTIEYINE LLRTVDELKI  300
LVDKKRRWRE RARKTATGDQ AAGDMESSSI TPPMDDADRA SKGVLRSSWL QRRSKDTFVD  360
VRIVDDEANI KLTRRKMMNC LLIVAKVLDE LHLELLHLSG GNVGYSHIFM INTKVSVTLS  420
QVLSMPSSRV SGLTKDKLVL LQIHEGSSVY ASAIAKKLIE AMDMSDPTLP ASF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06170.2	1e-39	bHLH family protein