PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW23969.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 202aa MW: 23520.4 Da PI: 8.1469

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW23969.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.7	6.6e-19	4	49	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W +eEde+l+++v ++G+++W++Ia++++ gR++k+c++rw++ RWW23969.1 4 RGHWRPEEDEKLKELVSRFGPHNWNAIAEKLQ-GRSGKSCRLRWFNQ 49 899***************************.*********996 PP
2	Myb_DNA-binding	56.1	8.3e-18	56	99	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l+ ++ +G++ W++Iar ++ gRt++ +k++w+ RWW23969.1 56 RSPFTEEEEERLLASHRVHGNR-WAAIARLFP-GRTDNAVKNHWHV 99 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MCSRGHWRPE EDEKLKELVS RFGPHNWNAI AEKLQGRSGK SCRLRWFNQL DPRINRSPFT 60 EEEEERLLAS HRVHGNRWAA IARLFPGRTD NAVKNHWHVI MARRHRKATA KSIYPATARS 120 TEAKDEGSEP RHIYDTLKLL PKAFFSDLHD HIPRMAKDGE SSTEFYDFLQ VNTESDGAKC 180 HSSVEEVEEE WRKAGVPFID FL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	7e-75	MYB family protein