PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW24214.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family HD-ZIP
Protein Properties Length: 441aa    MW: 49475.7 Da    PI: 4.92
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW24214.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox48.51.5e-151391856
                HHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox 18 lFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                +F+ +++p++++r++L++ lgL+ rq+k+WFqNrR+++k
  RWW24214.1  1 MFKVCPHPDEKQRKQLSRDLGLEPRQIKFWFQNRRTQMK 39
                6999********************************998 PP
2START100.43.2e-322054373167
                 HHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGG..................... CS
       START   3 aeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddke..................... 70 
                 a  a++e++++++ +ep+Wvks     ++++ +++ + f++s         ++ea+r+s++v m++++lv  ++d                        
  RWW24214.1 205 ATGAMEEVIRLVQTDEPLWVKSGsdgrDILQLETYDRMFQRSARqlrfsdTRVEASRDSALVVMNAVTLVDMFMDAVSsnlvegnefsfdllplnwisl 303
                 6679******************98898555555555555444336679999************************999999****99999999999999 PP

                 ..CT-TT-S....EEEEEEEECTT...............................EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE CS
       START  71 ..qWdetla....kaetlevissg...............................galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvd 131
                   +W e ++    ka t+ev+  g                               +  ++m+ elq+lsp+vp Rdf f+Ry++q + g+w+++dvSvd
  RWW24214.1 304 qsKWGELFPtivsKARTVEVLAAGmagsrsgslvlvttvlelfclnpnflcdtdtSKGVQMYEELQVLSPVVPtRDFCFLRYCQQIEPGVWAVADVSVD 402
                 9999999989999***************************************99988999*************************************** PP

                 -TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEE CS
       START 132 seqkppesssvvRaellpSgiliepksnghskvtwv 167
                  + +++  +++ R+++lpSg+lie+ +ng+skv+ +
  RWW24214.1 403 FPGDNQ-LAPSSRSRRLPSGCLIEEIPNGYSKVIQI 437
                 *****9.7*************************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    
MFKVCPHPDE KQRKQLSRDL GLEPRQIKFW FQNRRTQMKA TALLPVAQQE RTDNCLLRAE  60
NDKIRCENIA MREALRNVIC PSCGGPPPDD DPYFDEQHLR MENAKLKEEV TSTSLPFRSY  120
TYIRRILDRV SSLASKYLGR PITQLPPVQP VSISSLDLSV GGYSNPGISP SLDLDLLCQS  180
SSSAFPYPFP ASMSELEKPL MVEMATGAME EVIRLVQTDE PLWVKSGSDG RDILQLETYD  240
RMFQRSARQL RFSDTRVEAS RDSALVVMNA VTLVDMFMDA VSSNLVEGNE FSFDLLPLNW  300
ISLQSKWGEL FPTIVSKART VEVLAAGMAG SRSGSLVLVT TVLELFCLNP NFLCDTDTSK  360
GVQMYEELQV LSPVVPTRDF CFLRYCQQIE PGVWAVADVS VDFPGDNQLA PSSRSRRLPS  420
GCLIEEIPNG YSKVIQIIVH A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.11e-119HD-ZIP family protein