PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW24405.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 582aa MW: 63855.5 Da PI: 6.3604

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW24405.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.6	9.5e-13	428	474	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq RWW24405.1 428 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYITELQ 474 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MSDFFWSEEE RGMAGAVLGP EAFDYLAASR ASSDGLTAAA SSAEADLQSR LLDLVEGPPD 60 RPGLGWNYAI FWQISRAKSG DLVLGWGDGS CRDLRDGEEA AAAVARSIGD DESQQKMRRA 120 VLQKLHVYFG GSDEDNYALR LDQVTDAEMF FLVSMYFSFP RGKGAPGRAL AAGKHLWILS 180 PSDYCYRGFL AASAGFRTIV VVPFDTGVLE LGSVRSLAEC PNSLQTIKSV FSGTTPAGML 240 QSREKNKSNG SETCPKIFGK DLNLGTSNVN DKHLVTKVED SSWDTQLKRG SGDWVLFPNV 300 RKGMQSFSWN HLRGPSSHQQ QFGNGAVIAS SEVGDHSDGV RGDALLGQLQ IQKNQHKPQQ 360 SLQPPPRQID FSGGTSTAGS LIPHIGALEG EHADIEVSCK DERVGPPDER RPRKRGRKPA 420 NGREEPLNHV EAERQRREKL NQRFYALRAV VPNISKMDKA SLLGDAIAYI TELQKRLKEM 480 ESERDRFLES NAMDHSTRVH QPEVDVQALE DEVIVQVSSP LNTHPVSKVF QALKEVQVNV 540 AESKVTGDGE TIQHTFIIKS RGSEQQIKDK IIAALSHASD ST

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MSDFFWSEEE RGMAGAVLGP EAFDYLAASR ASSDGLTAAA SSAEADLQSR LLDLVEGPPD  60
RPGLGWNYAI FWQISRAKSG DLVLGWGDGS CRDLRDGEEA AAAVARSIGD DESQQKMRRA  120
VLQKLHVYFG GSDEDNYALR LDQVTDAEMF FLVSMYFSFP RGKGAPGRAL AAGKHLWILS  180
PSDYCYRGFL AASAGFRTIV VVPFDTGVLE LGSVRSLAEC PNSLQTIKSV FSGTTPAGML  240
QSREKNKSNG SETCPKIFGK DLNLGTSNVN DKHLVTKVED SSWDTQLKRG SGDWVLFPNV  300
RKGMQSFSWN HLRGPSSHQQ QFGNGAVIAS SEVGDHSDGV RGDALLGQLQ IQKNQHKPQQ  360
SLQPPPRQID FSGGTSTAGS LIPHIGALEG EHADIEVSCK DERVGPPDER RPRKRGRKPA  420
NGREEPLNHV EAERQRREKL NQRFYALRAV VPNISKMDKA SLLGDAIAYI TELQKRLKEM  480
ESERDRFLES NAMDHSTRVH QPEVDVQALE DEVIVQVSSP LNTHPVSKVF QALKEVQVNV  540
AESKVTGDGE TIQHTFIIKS RGSEQQIKDK IIAALSHASD ST

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	410	418	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	2e-75	bHLH family protein