PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW24410.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

NAC

Protein Properties

Length: 378aa MW: 40981.6 Da PI: 8.5396

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW24410.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179	1.2e-55	15	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeel+++yL kkv +++++ ++i+e+d++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ + + RWW24410.1 15 LPPGFRFHPTDEELITYYLLKKVLDSSFTG-RAIAEIDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATDAGYWKATGKDREIYSSkTMS 112 79***********************999.89***********99999************************************985566 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrle 129 lvg+kktLvfykgrapkgek++Wvmheyrle RWW24410.1 113 LVGMKKTLVFYKGRAPKGEKSNWVMHEYRLE 143 7**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MENCGRHFDN SEAQLPPGFR FHPTDEELIT YYLLKKVLDS SFTGRAIAEI DLNKCEPWEL 60 PEKAKMGEKE WYFFSLRDRK YPTGLRTNRA TDAGYWKATG KDREIYSSKT MSLVGMKKTL 120 VFYKGRAPKG EKSNWVMHEY RLEGKFAYHF LSRSSKVSHL LHAPTCHLML KPALIVDEWV 180 VSRVFQKCGG GGGSGKKTRL ALAGSHFSNS GNTGGGGGGC GSTSSSSLPL LLEPTPLPFS 240 AALRAPDRES CSYDSTDREP VPCFSTAAAA ATGLGLYIPP PQPPPPQGPA IFGPSSGFPS 300 LRSLHENLQL PFFLSGMAAQ PVYAGPASAV VLDSGIGTRS EGAGWPSDLD RKAEAAAAVV 360 RAHPMPVGST ELDCLWTF

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MENCGRHFDN SEAQLPPGFR FHPTDEELIT YYLLKKVLDS SFTGRAIAEI DLNKCEPWEL  60
PEKAKMGEKE WYFFSLRDRK YPTGLRTNRA TDAGYWKATG KDREIYSSKT MSLVGMKKTL  120
VFYKGRAPKG EKSNWVMHEY RLEGKFAYHF LSRSSKVSHL LHAPTCHLML KPALIVDEWV  180
VSRVFQKCGG GGGSGKKTRL ALAGSHFSNS GNTGGGGGGC GSTSSSSLPL LLEPTPLPFS  240
AALRAPDRES CSYDSTDREP VPCFSTAAAA ATGLGLYIPP PQPPPPQGPA IFGPSSGFPS  300
LRSLHENLQL PFFLSGMAAQ PVYAGPASAV VLDSGIGTRS EGAGWPSDLD RKAEAAAAVV  360
RAHPMPVGST ELDCLWTF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	2e-95	NAC family protein