PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW24480.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 228aa    MW: 24887.9 Da    PI: 6.4066
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW24480.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260114.76.2e-36797190
      DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90
                +C aCk+lrrkCa++Cv+apyf +++ +++fa++hk+FGasnv kll +lp  +r++a+ ++ yeA+ar+++P+yG+v++i++lqqq+++l
  RWW24480.1  7 PCGACKFLRRKCASGCVFAPYFHHQHgAAHFAAIHKVFGASNVAKLLMHLPMADRPEAAVTISYEAQARLQNPIYGCVAHIFALQQQVSNL 97
                7*********************998879************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MAGLGSPCGA CKFLRRKCAS GCVFAPYFHH QHGAAHFAAI HKVFGASNVA KLLMHLPMAD  60
RPEAAVTISY EAQARLQNPI YGCVAHIFAL QQQVSNLVLA SLEAQAARRR GNGTASGTIR  120
QEEDMLCNTG PPHRQDLQGF FIDQAGSRKT PPQFASTLSM DVNCYPNSLW SFEENAPPTN  180
FDMADEDFSF EAFSLTSCFD TEDEFWRSAF HYGNGDLQPA ASTGVGRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.13e-45LBD family protein