PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW24600.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family HD-ZIP
Protein Properties Length: 342aa    MW: 38830.8 Da    PI: 5.2976
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW24600.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox469e-151391856
                HHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox 18 lFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                +F+ +++p++++r +L++ lgL+ rq+k+WFqNrR+ +k
  RWW24600.1  1 MFKACPHPDEKQRMKLSRDLGLEPRQIKFWFQNRRTLMK 39
                69*********************************9877 PP
2START115.29.7e-371523382167
                 HHHHHHHHHHHHHHHC-TT-EEEE.......EXCCTTEEEEEEESSS........SCEEEEEEEECCSCHHHHHHHHHCCCGG.CT-TT-S....EEEE CS
       START   2 laeeaaqelvkkalaeepgWvkss.......esengdevlqkfeeskv.......dsgealrasgvvdmvlallveellddke.qWdetla....kaet 81 
                 +a +a++e+vk+++ +ep+W ks+       +se+++   q++    +        ++ea+r+s++v+m++a+lv  ++d    +W e ++     a t
  RWW24600.1 152 MASAALEEVVKLIQTNEPLWLKSAsngtevlQSETYERIFQRP----SqqfkfsdTRTEASRDSALVIMDAATLVDMFMDAVStKWMELFPtivsNART 246
                 67899*******************6666555555555555555....045589*99********************************9999999**** PP

                 EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEE CS
       START  82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwv 167
                 ++v+ sg      g l+lm+ elq+lsp+vp R f f+Ry++q   + wvi+dvSv+ + +     ++  + +lpSg+lie ++ng+skv+ v
  RWW24600.1 247 IDVLASGmsgtrsGSLVLMYEELQVLSPVVPtRHFCFLRYCQQIDPDLWVIADVSVNYPMDSRH-LPSPLSCKLPSGCLIEAMPNGYSKVIGV 338
                 ***********************************************************99985.44444449*****************977 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MFKACPHPDE KQRMKLSRDL GLEPRQIKFW FQNRRTLMKA TFPFPFFSMI FTHERSDNCT  60
LRAENDKIRC ENITMEEALK KAVCLSCGAA PPADNPFFDE QKLRMENTRL KEEVLELPDD  120
GKISYPSISS SVLSYPSPTT ISDLEKPIMM EMASAALEEV VKLIQTNEPL WLKSASNGTE  180
VLQSETYERI FQRPSQQFKF SDTRTEASRD SALVIMDAAT LVDMFMDAVS TKWMELFPTI  240
VSNARTIDVL ASGMSGTRSG SLVLMYEELQ VLSPVVPTRH FCFLRYCQQI DPDLWVIADV  300
SVNYPMDSRH LPSPLSCKLP SGCLIEAMPN GYSKVIGVQF SR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17920.12e-96HD-ZIP family protein