PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW24835.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family AP2
Protein Properties Length: 365aa    MW: 39599.4 Da    PI: 4.876
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW24835.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.81.1e-07159206143
         AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.........krkrfslgkfgtaeeAa 43 
                 s+y+GV++++++grW+++I+    +          + k+++lgk  t  eA 
  RWW24835.1 159 SQYRGVTFYRRTGRWESHIC---GDSffplilsrdCGKQVYLGKNST-LEAS 206
                 78****************54...44455566543444****999999.8876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MYSIDCARHI MEFDLNVTYR GDSIAAAPYS VESSNTDIAT AAAVGDEDAR SSNGAASVFC  60
SDVLGRPAEP VVDEDEAEEV GCVSPEPGIA TRQLFPLAAE VAPMQPHVPV DSSSSSPLSF  120
AAVGFWKGTT GGLAEPEANL LLQRRQVKKS RRGPRSRSSQ YRGVTFYRRT GRWESHICGD  180
SFFPLILSRD CGKQVYLGKN STLEASILPT LLQGLLISSS PRVCFGGLIS NEFGGSLHRE  240
EQQRCCIYLL DFVCRAYDRA AIKFRGLDAD INFNLSDYDE DLKQVTAESL NYLNISPASA  300
VAPQYPHLWA SSCPSFFFSI EEEAEAWQIS PSPLQLVSHA ASSGFSTAAA TTMAALPSFP  360
SVRNH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G39250.11e-16AP2 family protein