PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW25011.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 527aa MW: 58264.3 Da PI: 8.1661

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW25011.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	49	1.6e-15	225	311	2	74
trihelix 2 WtkqevlaLiearr.......emeerlrrgk.............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtse 74 W+ +e+++Liea++ + r k +++ +W++v + ++++g+ rs++qC+++w+nl ++ykk+++ e + +++ RWW25011.1 225 WSLNETMVLIEAKKmdyerraQ------RLKelprgssgigssrAQEMRWKWVEDCCWRHGCYRSQNQCNDRWDNLMRDYKKVRAYELSLSAG 311 **********9954443331......222344444556666599***********************************9988776555 PP

Sequence ? help Back to Top
Protein Sequence Length: 527 aa Download sequence
PHRLRSLEKR ALKQEPLDLL QVSLGAFRPL KSPNGKPQID TVSGVRWIEE EGTKTLIGDR 60 KHQDRGITYP KARPHRRPST SGIAGSELPP VEHSGFRGDH SGSALTFAQA CLISGCTVGF 120 IDNVYIAEGE GDCRLEETGK AGTVGRKMKM PGNSGKAGVF FYCAACTHDD PQGWLAEASV 180 HPSTQANVRL KGSQETDAKE RQDREEEEEE EENEDRCREY RKGNWSLNET MVLIEAKKMD 240 YERRAQRLKE LPRGSSGIGS SRAQEMRWKW VEDCCWRHGC YRSQNQCNDR WDNLMRDYKK 300 VRAYELSLSA GGSPGLSYWK LERHERKEKN LPSNLLPEIY EALTEVVQRR AMAEKASGGA 360 CAAAARPVQE ESQLGGASAS MPHSSPGAGS QAPEPPLIAP PLPPYPPPHS RPMATIDSED 420 SQHTVSPERK RKRGGGSSSS RSRSNSMELS SAISKCASII AEALQAGEQK EETRHKDLVS 480 IEERKAKLEE SKSEMSSQSM DGLASAINKL ASSILGLATD RMQKLQK

Sequence ? help Back to Top

Protein Sequence Length: 527 aa Download sequence

PHRLRSLEKR ALKQEPLDLL QVSLGAFRPL KSPNGKPQID TVSGVRWIEE EGTKTLIGDR  60
KHQDRGITYP KARPHRRPST SGIAGSELPP VEHSGFRGDH SGSALTFAQA CLISGCTVGF  120
IDNVYIAEGE GDCRLEETGK AGTVGRKMKM PGNSGKAGVF FYCAACTHDD PQGWLAEASV  180
HPSTQANVRL KGSQETDAKE RQDREEEEEE EENEDRCREY RKGNWSLNET MVLIEAKKMD  240
YERRAQRLKE LPRGSSGIGS SRAQEMRWKW VEDCCWRHGC YRSQNQCNDR WDNLMRDYKK  300
VRAYELSLSA GGSPGLSYWK LERHERKEKN LPSNLLPEIY EALTEVVQRR AMAEKASGGA  360
CAAAARPVQE ESQLGGASAS MPHSSPGAGS QAPEPPLIAP PLPPYPPPHS RPMATIDSED  420
SQHTVSPERK RKRGGGSSSS RSRSNSMELS SAISKCASII AEALQAGEQK EETRHKDLVS  480
IEERKAKLEE SKSEMSSQSM DGLASAINKL ASSILGLATD RMQKLQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	4e-47	Trihelix family protein