PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW25076.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 688aa MW: 74398.4 Da PI: 5.9299

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW25076.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.1	1.3e-12	511	556	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L Av YI++L RWW25076.1 511 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAVSYINEL 556 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 688 aa Download sequence
MNLWADDNAS MMEAFTDLQG FPWAATPTPS TPPLPTTLDP GRALIGPSTP APPPTAYFNQ 60 ETLQQRLQTL IDGARENWTY GIFWQSSMDA ASGASFLGWG DGYYKGCEED KRKQRAASAA 120 SAAEQEHRKR VLRELNSLIS AGGSLAQDET IEEEVTDTEW FFLVSMTQSF VNGAGLPGQA 180 LYAGAPSWVA GRDHLAAAPC ERARQAQLFG IQTMVCAPVG SGVLELGSTD VILHSPEIMG 240 KIRVLFNFGS PDSPSAAAAS WIAPQSAAAT PAADQGETDP SVLWLTEPSM VEIKDSVSPA 300 PAVADIFVTK PPIQLETSPS STVHTENPAS SMQIQKALYG HQQQIHQPQH QSSGSKPQSQ 360 PFFSKELNFS GFASSGSVAS HSVKPELGDI LNFAGGKRNS SPAPVTGSVF SHHQAAAVAD 420 DKKNSKSTGT TSMVSNNDEG MLSFSSAPTR PPSNSQLKSS CGGGVLDGAD SDQSDLEASV 480 REVESIRVVE PEKRPRKRGR KPANGREEPL NHVEAERQRR EKLNQRFYAL RAVVPNVSKM 540 DKASLLGDAV SYINELRSKL QASEADKEEL QSQMEIIKKE RESARAAPPP RYDPKMMKGC 600 HGVEIEVKLL GSEAMIRLQS QKRNHPAARL MSALQDLDLE VHYASVSVVK DLMIQQATVQ 660 MSSRAYTQEQ LNAALYSRLV AEAPPFSR

Sequence ? help Back to Top

Protein Sequence Length: 688 aa Download sequence

MNLWADDNAS MMEAFTDLQG FPWAATPTPS TPPLPTTLDP GRALIGPSTP APPPTAYFNQ  60
ETLQQRLQTL IDGARENWTY GIFWQSSMDA ASGASFLGWG DGYYKGCEED KRKQRAASAA  120
SAAEQEHRKR VLRELNSLIS AGGSLAQDET IEEEVTDTEW FFLVSMTQSF VNGAGLPGQA  180
LYAGAPSWVA GRDHLAAAPC ERARQAQLFG IQTMVCAPVG SGVLELGSTD VILHSPEIMG  240
KIRVLFNFGS PDSPSAAAAS WIAPQSAAAT PAADQGETDP SVLWLTEPSM VEIKDSVSPA  300
PAVADIFVTK PPIQLETSPS STVHTENPAS SMQIQKALYG HQQQIHQPQH QSSGSKPQSQ  360
PFFSKELNFS GFASSGSVAS HSVKPELGDI LNFAGGKRNS SPAPVTGSVF SHHQAAAVAD  420
DKKNSKSTGT TSMVSNNDEG MLSFSSAPTR PPSNSQLKSS CGGGVLDGAD SDQSDLEASV  480
REVESIRVVE PEKRPRKRGR KPANGREEPL NHVEAERQRR EKLNQRFYAL RAVVPNVSKM  540
DKASLLGDAV SYINELRSKL QASEADKEEL QSQMEIIKKE RESARAAPPP RYDPKMMKGC  600
HGVEIEVKLL GSEAMIRLQS QKRNHPAARL MSALQDLDLE VHYASVSVVK DLMIQQATVQ  660
MSSRAYTQEQ LNAALYSRLV AEAPPFSR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	493	501	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-146	bHLH family protein