PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW25246.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 299aa MW: 33469.4 Da PI: 5.8976

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW25246.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36.3	1.3e-11	20	56	1	33
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT....T CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg....k 33 rg+WT+eEd++lv++v+ +G ++W+t +++ g + RWW25246.1 20 RGAWTAEEDQKLVEYVRDHGDKNWRTLPAKAGpfssL 56 89**************************999866552 PP
2	Myb_DNA-binding	54.2	3.3e-17	113	158	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE++l+++++++lG++ W++Ia +++ gRt++++k++w+++l RWW25246.1 113 RGNISDEEEDLIIRLHNLLGNR-WSLIAGRLP-GRTDNEIKNHWNTHL 158 7899****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MVKKTERAKQ KAAADIVVNR GAWTAEEDQK LVEYVRDHGD KNWRTLPAKA GPFSSLSLSL 60 SLSHTHTHTH THTQRKPKKT PFHQAKFLLA GLNRCGKSCR LRWLNYLRPG IKRGNISDEE 120 EDLIIRLHNL LGNRWSLIAG RLPGRTDNEI KNHWNTHLSR RPVTIDDLNL KLNQQMEGGR 180 EGGALVSPVT SSRDLTTLVD HVEDEWVLDG TAELLHHSEL DMDQLFDLMP NPDGGSEFGA 240 EADGSGGEEG YRDVKEGEIS GAKAEGCPDA QAAAWDASAF DVDLERFMGY DDLAFYFMD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09460.1	8e-47	MYB family protein