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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWW25270.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | NAC | ||||||||
| Protein Properties | Length: 210aa MW: 23050 Da PI: 10.7388 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 104.6 | 1.3e-32 | 5 | 78 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+ +ewyfF rd+kyatg r+nrat+sgyWkatgkd++v + +g lvg++ktLvfy+grapkg+kt+W+mhe+r+
RWW25270.1 5 GGREWYFFNLRDRKYATGLRTNRATRSGYWKATGKDRTVSR-RGVLVGMRKTLVFYQGRAPKGRKTNWIMHEFRM 78
568************************************99.99*****************************97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 210 aa Download sequence |
MACVGGREWY FFNLRDRKYA TGLRTNRATR SGYWKATGKD RTVSRRGVLV GMRKTLVFYQ 60 GRAPKGRKTN WIMHEFRMAG SAHPHKTPLM KSKSATSEPT KVAGNGEAAS SSLPPPMDSS 120 VDKQVSAFTD LSPHCGATDG ATNPRFMVQR SLQIKSSGSS ASSYFTELEG NPKREVPPSP 180 CLAPRSSGSY FTENGLPYVW NPFGAFHSTS |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G56010.1 | 6e-51 | NAC family protein | ||||




