PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW25486.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HB-other

Protein Properties

Length: 202aa MW: 23354.3 Da PI: 8.8011

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW25486.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.1	1.7e-19	38	96	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 k ++t+eq+e+Le+l++ +++ps +r++L +++ +++ +q+kvWFqNrR +ek+ RWW25486.1 38 KYVRYTPEQVEALERLYHDCPKPSSLRRQQLIRECpilsNIDPKQIKVWFQNRRCREKQ 96 5679*****************************************************97 PP
2	bZIP_1	23.2	1.5e-07	90	133	18	61
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 18 rrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 rr+R++ ++e ++L+ +L+a Nk L +e+++l+k+v++l RWW25486.1 90 RRCREKQRKEAAQLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 133 9***************************************9965 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
KVRSVVAGGE PFSLTAGVRE MIPVTSCKEG KMGIDQGKYV RYTPEQVEAL ERLYHDCPKP 60 SSLRRQQLIR ECPILSNIDP KQIKVWFQNR RCREKQRKEA AQLQAVNRKL TAMNKLLMEE 120 NDRLQKQVSQ LVYENGYFLF FKDFFIVDAN RLCCACCRII SIAEETLSEF LSKATGTAVE 180 WVQMPGMKVW TSLFDFLFCL LP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52150.3	6e-84	HD-ZIP family protein