PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW25501.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 362aa MW: 40167.3 Da PI: 6.9862

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW25501.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.4	7.8e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l d+v++ G g+W++ ++ g++R++k+c++rw +yl RWW25501.1 14 RGPWTPEEDKKLRDYVQKNGHGSWRRLPKLAGLNRCGKSCRLRWINYL 61 89********************************************97 PP
2	Myb_DNA-binding	50.7	4.2e-16	67	135	1	48
TSSS-HHHHHHHHHHHHHTTTT......................-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg......................tWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE+ l++d++ ++G++ +W+tI + ++ gRt++++k++w+++l RWW25501.1 67 RGNFTEEEESLIIDLHSLHGNKyafsfstpyfracfltpcfsnrRWSTIVASLP-GRTDNEIKNYWNTHL 135 89**************************************************.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MGRSPCCDEV GLKRGPWTPE EDKKLRDYVQ KNGHGSWRRL PKLAGLNRCG KSCRLRWINY 60 LRPDIKRGNF TEEEESLIID LHSLHGNKYA FSFSTPYFRA CFLTPCFSNR RWSTIVASLP 120 GRTDNEIKNY WNTHLRKKLL RMGIDPVTHQ PITGSRVLPG LPELLAAANL VGGFTSSLND 180 PLHLQADAAH LIKLHLVQNL VQVLTSNPTP NLNPIMGLFG SAVLRNYRLN DVDVPSSRQL 240 ESLLRHLHHG SLLQSTAPMA SSLSTQGWQS FVDSLHRSTP ESSRSVDAGD QTAAAATDDL 300 SSVNEGCLPT SDPTPPFLSS SPVNMNESET ITIDGSINVP FEAWDGNLDD LDDLGHWKEI 360 LG

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MGRSPCCDEV GLKRGPWTPE EDKKLRDYVQ KNGHGSWRRL PKLAGLNRCG KSCRLRWINY  60
LRPDIKRGNF TEEEESLIID LHSLHGNKYA FSFSTPYFRA CFLTPCFSNR RWSTIVASLP  120
GRTDNEIKNY WNTHLRKKLL RMGIDPVTHQ PITGSRVLPG LPELLAAANL VGGFTSSLND  180
PLHLQADAAH LIKLHLVQNL VQVLTSNPTP NLNPIMGLFG SAVLRNYRLN DVDVPSSRQL  240
ESLLRHLHHG SLLQSTAPMA SSLSTQGWQS FVDSLHRSTP ESSRSVDAGD QTAAAATDDL  300
SSVNEGCLPT SDPTPPFLSS SPVNMNESET ITIDGSINVP FEAWDGNLDD LDDLGHWKEI  360
LG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	7e-85	MYB family protein