PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW25575.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HB-other

Protein Properties

Length: 473aa MW: 52654.2 Da PI: 5.7096

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW25575.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	50.4	3.6e-16	28	76	8	56
-HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 8 tkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ q+++Le++++ ++psa+++eeLAk +gL+ +qV++WF NrR+ ++ RWW25575.1 28 NPLQVQILENAYAVAPNPSASMKEELAKLTGLDYKQVQYWFGNRRYMDR 76 678******************************************9776 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MDHGEGNGEK KLLEVGFGAS DVKKQWKNPL QVQILENAYA VAPNPSASMK EELAKLTGLD 60 YKQVQYWFGN RRYMDRHGPR RYRTRNEGDG KFVNFAAVSS SGLSSSSTSF ADPVTGTESS 120 SSRRNSEILQ HLMPERLAQL VTQMQDQQTV IMHVEKKLGH PLKADGPILG VEFKPLPPGA 180 FGAPLGIVIL PTLPKLLYFI QMANAAQQRS SLWPCDGKVT ERPTVKSIKV LYSISSFIVD 240 AKKEGDSGLP DVGHGDPGQG GHGQSGEGSS HLQMGSGENH ISAVVAFKEV DNKNFNKVVM 300 NQTTDLPHQV GHWHGYSHYF VKPRERSHSN ITDTRDTRVS YFTNTGRCVR PLIAEWNERE 360 KKAVYIDNDN ESSLSWSTGS DSTCSDGFDG QATENGRHYA QTKSVDPCDI DIKNDDIHKD 420 HNRQEVVDVD LNVEDDEDET DDEDYNMKEE SKDKKVEVNE DRRTSPLSSE QTA

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MDHGEGNGEK KLLEVGFGAS DVKKQWKNPL QVQILENAYA VAPNPSASMK EELAKLTGLD  60
YKQVQYWFGN RRYMDRHGPR RYRTRNEGDG KFVNFAAVSS SGLSSSSTSF ADPVTGTESS  120
SSRRNSEILQ HLMPERLAQL VTQMQDQQTV IMHVEKKLGH PLKADGPILG VEFKPLPPGA  180
FGAPLGIVIL PTLPKLLYFI QMANAAQQRS SLWPCDGKVT ERPTVKSIKV LYSISSFIVD  240
AKKEGDSGLP DVGHGDPGQG GHGQSGEGSS HLQMGSGENH ISAVVAFKEV DNKNFNKVVM  300
NQTTDLPHQV GHWHGYSHYF VKPRERSHSN ITDTRDTRVS YFTNTGRCVR PLIAEWNERE  360
KKAVYIDNDN ESSLSWSTGS DSTCSDGFDG QATENGRHYA QTKSVDPCDI DIKNDDIHKD  420
HNRQEVVDVD LNVEDDEDET DDEDYNMKEE SKDKKVEVNE DRRTSPLSSE QTA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	2e-10	HB-other family protein