PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW25715.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

SBP

Protein Properties

Length: 441aa MW: 48274 Da PI: 9.0028

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW25715.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.7	2.1e-40	177	253	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC++dls ak+yhr+h+vCe hsk+p+v+v+g++ rfCqqCsrfh+lsefD++krsCrrrL++hn+rrrk+q+ RWW25715.1 177 CQVEGCNVDLSAAKDYHRKHRVCESHSKSPKVIVAGQTCRFCQQCSRFHDLSEFDQKKRSCRRRLSDHNARRRKPQP 253 **************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MDLSSKIPFQ RDWENLSLFS RKEGEISKHA QQSDWEVVDN HGSYGNGNGS VYSSGGGLGP 60 GSDLGNGSSR SSISSSIGFP SKAGTGALGF IIDLVEKPPE ILKENKDLAM VETGILHRVV 120 AVDGPKEPRT QLKLGKRTYF EGGIHITNSS SLASTNPSIG LVKKPKVSQQ NMQSSHCQVE 180 GCNVDLSAAK DYHRKHRVCE SHSKSPKVIV AGQTCRFCQQ CSRFHDLSEF DQKKRSCRRR 240 LSDHNARRRK PQPGTIGLGS SVLSASYYDD RQRMNLIFGR APFNHVAYMA NSTWDDSGGF 300 KLIPSQEPWI NFGKSGDING QLHFSSNQIS KNVSRVNHEW DGLLPFKGTN AAATNKGPGA 360 PVFASNLDGA LDLQHALSLL STESWVPYQE PVSDFQSVNA NIITSHSAIH PTNAMAGSWQ 420 KTELLLPWTL PFNLQNNANQ I

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MDLSSKIPFQ RDWENLSLFS RKEGEISKHA QQSDWEVVDN HGSYGNGNGS VYSSGGGLGP  60
GSDLGNGSSR SSISSSIGFP SKAGTGALGF IIDLVEKPPE ILKENKDLAM VETGILHRVV  120
AVDGPKEPRT QLKLGKRTYF EGGIHITNSS SLASTNPSIG LVKKPKVSQQ NMQSSHCQVE  180
GCNVDLSAAK DYHRKHRVCE SHSKSPKVIV AGQTCRFCQQ CSRFHDLSEF DQKKRSCRRR  240
LSDHNARRRK PQPGTIGLGS SVLSASYYDD RQRMNLIFGR APFNHVAYMA NSTWDDSGGF  300
KLIPSQEPWI NFGKSGDING QLHFSSNQIS KNVSRVNHEW DGLLPFKGTN AAATNKGPGA  360
PVFASNLDGA LDLQHALSLL STESWVPYQE PVSDFQSVNA NIITSHSAIH PTNAMAGSWQ  420
KTELLLPWTL PFNLQNNANQ I

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	233	250	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	2e-53	SBP family protein