PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW25805.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 156aa MW: 17406.9 Da PI: 6.7419

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW25805.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	141.2	3.3e-44	6	105	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +Ca+Ck+lrr+C+kdC++apyfp+++p+kf +vhk+FGasnv+k+l++lp ++r da+sslvyeA ar++dPvyG+vg i+ lq+q++ql+ +l ++++ RWW25805.1 6 PCASCKLLRRRCTKDCIFAPYFPSDDPHKFSIVHKIFGASNVSKMLQELPVHQRADAVSSLVYEATARTKDPVYGCVGAISYLQNQVSQLQMQLTVAQT 104 7*********************************************************************************************99998 PP DUF260 100 e 100 e RWW25805.1 105 E 105 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence
MEGNSPCASC KLLRRRCTKD CIFAPYFPSD DPHKFSIVHK IFGASNVSKM LQELPVHQRA 60 DAVSSLVYEA TARTKDPVYG CVGAISYLQN QVSQLQMQLT VAQTEILCAQ MQQVPAMAEQ 120 QIEAYDNNLT GMPQLMNNAS SSSLAQDQLK REFLWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	4e-73	LBD family protein