![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | RWW26042.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
| Family | SAP | ||||||||
| Protein Properties | Length: 567aa MW: 62157.1 Da PI: 8.5426 | ||||||||
| Description | SAP family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | SAP | 62 | 9.3e-20 | 2 | 88 | 5 | 80 |
SAP 5 sssssseseegseggeggdass...........gesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvc 80
sss ++++ g++g++g +a++ s+ psssrqr+a+evwpe f+ea+a+qva+da+rs+Grlaaa+a++ vfqv
RWW26042.1 2 SSSPPERRGGGADGERGEEAAApgaraaaglgrRRSGDPSSSRQRSADEVWPEHFVEAVAAQVAVDATRSAGRLAAAPAVVAVFQVF 88
56666777777777777777668888899998788899***********************************************95 PP
| |||||||
| 2 | SAP | 429.5 | 3e-131 | 188 | 566 | 78 | 454 |
SAP 78 qvcstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfd 176
+vcstwravsrs+llwq l+rr+W+r + Wr+e++ hrta+nfr+rr +y +l pa ++dalsCr+lalsd++l aGf dG+v lfd
RWW26042.1 188 NVCSTWRAVSRSELLWQDLCRRVWSRRRSSLPSWRDEFVRLHRTAANFRNRRCAYSQL--LPA------SSDALSCRRLALSDHHLVAGFHDGSVLLFD 278
7**************************9999***********************9765..565......3479************************** PP
SAP 177 letrlhvstflpq.hrdrlGrfsravsGivis...dsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhi 271
l + + + t++++ rdrlGrfs+a+sGi++ + l+f++ dGdihva +d+ +++ rra++G++++dG+lvdf+G +rWwvGl+aGvpGr++hi
RWW26042.1 279 LPAGQLLATYRADpLRDRLGRFSQAISGIILLaepNECLTFSSQDGDIHVASLDV--SGSVRRAHVGNLMEDGTLVDFTGDARWWVGLFAGVPGRSWHI 375
*********997538***************96333678*****************..5599************************************** PP
SAP 272 WdaeteelvfvGGsltdPeavmGWhmltelt.elvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvr 369
Wda+te+lv+vGG+ltd +a+ GWhmlt+l ++ r r++e ++v Ct +++ v+dl ++g +l+++e +G +v s+da + +++vdsrG a+vr
RWW26042.1 376 WDADTEQLVYVGGTLTDSHAILGWHMLTDLSrPVLARTRIAEPGIVVGCTPTSMEVVDLNDSGTILNQQELPHGAVVDSVDACECRVMAVDSRGLAKVR 474
******************************945679*************************************************************** PP
SAP 370 rvenleevcrfrvrg.....aqr...gvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfga 454
v +l+e+crf+ + +q+ +v +C+n ya+v++g +rvW+ + + ylys+rer+ge+ a+dr+v++ ++d+ +hl+dfga
RWW26042.1 475 EVATLQELCRFNTGRrvegqQQQgtvRVKACMNWCYAIVCSGRGVRVWDATTGA-YLYSFRERIGEAAVAAANDRYVSAWADDSGLHLWDFGA 566
***********7543333242222336889*******************99966.*************************************8 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 567 aa Download sequence |
MSSSPPERRG GGADGERGEE AAAPGARAAA GLGRRRSGDP SSSRQRSADE VWPEHFVEAV 60 AAQVAVDATR SAGRLAAAPA VVAVFQVFPS PLHLRCVIQA ERIMGRRHAL VGGEVPWSVS 120 TYRCSSDHSL LLTFSRSPRG KDRRKGSSGL AYSGWDGVRW DRIRQRGGTG AVSRRASLSY 180 VMPWYGLNVC STWRAVSRSE LLWQDLCRRV WSRRRSSLPS WRDEFVRLHR TAANFRNRRC 240 AYSQLLPASS DALSCRRLAL SDHHLVAGFH DGSVLLFDLP AGQLLATYRA DPLRDRLGRF 300 SQAISGIILL AEPNECLTFS SQDGDIHVAS LDVSGSVRRA HVGNLMEDGT LVDFTGDARW 360 WVGLFAGVPG RSWHIWDADT EQLVYVGGTL TDSHAILGWH MLTDLSRPVL ARTRIAEPGI 420 VVGCTPTSME VVDLNDSGTI LNQQELPHGA VVDSVDACEC RVMAVDSRGL AKVREVATLQ 480 ELCRFNTGRR VEGQQQQGTV RVKACMNWCY AIVCSGRGVR VWDATTGAYL YSFRERIGEA 540 AVAAANDRYV SAWADDSGLH LWDFGAL |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G35770.1 | 1e-102 | SAP family protein | ||||




