PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW26157.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 225aa    MW: 24256.8 Da    PI: 8.3707
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW26157.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601087.1e-34421491100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasn........vlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91 
                 +CaaCk+lrr+Ca+dC+++pyf  ++p+kfa vhk+FG++         v+ + +++pe +r da++slvyeA+ r+rdPvyG++g i++lqqq++ l+
  RWW26157.1  42 PCAACKLLRRRCAQDCPFSPYFSPHEPQKFALVHKVFGTDAkknpvcfvVVVVEQEVPEPQRADAANSLVYEANLRLRDPVYGCMGAISALQQQVQALE 140
                 7*************************************975333433323444578899**************************************** PP

      DUF260  92 aelallkee 100
                 ael+++++e
  RWW26157.1 141 AELQAVRAE 149
                 ****99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MPLHFRERME EVGKKIKREA DGITDRIGRQ VGPVGTLNTI TPCAACKLLR RRCAQDCPFS  60
PYFSPHEPQK FALVHKVFGT DAKKNPVCFV VVVVEQEVPE PQRADAANSL VYEANLRLRD  120
PVYGCMGAIS ALQQQVQALE AELQAVRAEI LKHKYGHAGG SIIPTSHAAL LPPSAAVSVA  180
APPPVPLPSL SPVTDAASSS NYTSLPSIST NYSSITTNHN VAYFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40470.15e-56LBD family protein