PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW26527.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 583aa MW: 64621.8 Da PI: 9.5243

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW26527.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	125.3	6.4e-39	211	349	2	133
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............ssssaseceaesssssasnsssg 88 g+kdrhsk++T++g+RdRRvRls+++a++f+dLqd+LG+d++sk+ieWL+++a ++i el+ + + ++ +++ +++ + ++++ RWW26527.1 211 SGGKDRHSKVYTAKGLRDRRVRLSVSTAIQFYDLQDRLGYDQPSKAIEWLIKAAAASINELPPLdgfpkllqpsgdD---QM---KADPVVEPAYNQQQ 303 689***********************************************************7776665442221...21...22222222223333 PP TCP 89 kaaksaakskksqksaasalnlak.esrakarararertrekmrik 133 + +++ +s++s++s+ s+l+l++ esr ar+rarer ++++ ++ RWW26527.1 304 HPPTKSGCSSNSDTSKGSVLSLSRsESRVMARERARERAAKDKEKD 349 566666799999999999*****************988877665 PP

Sequence ? help Back to Top
Protein Sequence Length: 583 aa Download sequence
MLTPRRKGRT KEIIFYPFLL YPLHHLPYEW REVWAPDRTV AEEIEVRKWR ILVRSWRSGV 60 GICGGSCLAR AEILMRIGGM QTGWGRSADF WPPGELEQRE ERRKSIASDS CCEKNKVASC 120 HLRPRTRSGA SKDPIWAPKR HESEMEFEEN NHARKRSRVV GNGSQAAKVG RKEHQDEDED 180 DGERKGGGVD VGRVAPWQHH SSRIFRVSRA SGGKDRHSKV YTAKGLRDRR VRLSVSTAIQ 240 FYDLQDRLGY DQPSKAIEWL IKAAAASINE LPPLDGFPKL LQPSGDDQMK ADPVVEPAYN 300 QQQHPPTKSG CSSNSDTSKG SVLSLSRSES RVMARERARE RAAKDKEKDR DDSDQIVASH 360 HQNLNPRLNP QTPSFTELLT GGSGNNGGSN ISAVAAGREN PGHNCIQKQI STADYFGQAG 420 LFTQSQKSHQ LPSGFSSQPH FGNSSPMGIL PFNIAATGDH QEMQQQFPFL HEHFFPVSAV 480 AATGDYNLNF SISSGLAGFN RGTLQSNSPA QLPQQQHHNH NHLQRLSSTV DGSNLQFFFG 540 AAAGSAAAAT NTENQFQSGF DGRLQLCYGD GYRQSDLKGK GKS

Sequence ? help Back to Top

Protein Sequence Length: 583 aa Download sequence

MLTPRRKGRT KEIIFYPFLL YPLHHLPYEW REVWAPDRTV AEEIEVRKWR ILVRSWRSGV  60
GICGGSCLAR AEILMRIGGM QTGWGRSADF WPPGELEQRE ERRKSIASDS CCEKNKVASC  120
HLRPRTRSGA SKDPIWAPKR HESEMEFEEN NHARKRSRVV GNGSQAAKVG RKEHQDEDED  180
DGERKGGGVD VGRVAPWQHH SSRIFRVSRA SGGKDRHSKV YTAKGLRDRR VRLSVSTAIQ  240
FYDLQDRLGY DQPSKAIEWL IKAAAASINE LPPLDGFPKL LQPSGDDQMK ADPVVEPAYN  300
QQQHPPTKSG CSSNSDTSKG SVLSLSRSES RVMARERARE RAAKDKEKDR DDSDQIVASH  360
HQNLNPRLNP QTPSFTELLT GGSGNNGGSN ISAVAAGREN PGHNCIQKQI STADYFGQAG  420
LFTQSQKSHQ LPSGFSSQPH FGNSSPMGIL PFNIAATGDH QEMQQQFPFL HEHFFPVSAV  480
AATGDYNLNF SISSGLAGFN RGTLQSNSPA QLPQQQHHNH NHLQRLSSTV DGSNLQFFFG  540
AAAGSAAAAT NTENQFQSGF DGRLQLCYGD GYRQSDLKGK GKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	4	10	PRRKGRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	9e-43	TCP family protein