PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW26798.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 542aa MW: 57847 Da PI: 4.7724

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW26798.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.1	2.5e-11	354	396	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+++L RWW26798.1 354 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLREL 396 79*******************66......*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MFSRIDGGLW MDDGGDDDDP VAWTRGNASS SSGGGMGETK EDELGLSGFK SMLVDDWYVG 60 GAAHHPFEAF QTQQDLKDVA FLPNPSPHEA LLLPPVDSLD QSQPFYSSRP ALSSLFNSSY 120 HFGVGVDLRS DAPGFLPAAP VLNPPDLMNG GGGAIDTVFG FVGIGTGGQL GCPELNSASQ 180 FSCALLPPPA EKCSVSSSGT TFCPADFDSL ENSPFLNRSK VLRPLEMFPT AGSQPTLFQK 240 RAAAALQQNS AAAAEKVGIL GPWASKVNCQ GSSGVAGLEE EKERKRKGNE VDEFDEGSID 300 GSGLHYDSDD FAGENAKVEE NAGNVGGGGG NSSSADVMAA DKGKKKGLPA KNLMAERRRR 360 KKLNDRLYML RSVVPKISKM DRASILGDAI EYLRELLQRI NDLQNELEST PSSSSLPTTN 420 ATSLHPSTPT LPTLPCRLKD ELEHCSSSLP SPNSQPARVV EVKMREGRAV DIHMFCARRP 480 GLLLSALRSL DSLGLDIQQA VISCFNGFAL DIFRAEQCRD PCVLPEEIKA VLLHSAGLLN 540 TM

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MFSRIDGGLW MDDGGDDDDP VAWTRGNASS SSGGGMGETK EDELGLSGFK SMLVDDWYVG  60
GAAHHPFEAF QTQQDLKDVA FLPNPSPHEA LLLPPVDSLD QSQPFYSSRP ALSSLFNSSY  120
HFGVGVDLRS DAPGFLPAAP VLNPPDLMNG GGGAIDTVFG FVGIGTGGQL GCPELNSASQ  180
FSCALLPPPA EKCSVSSSGT TFCPADFDSL ENSPFLNRSK VLRPLEMFPT AGSQPTLFQK  240
RAAAALQQNS AAAAEKVGIL GPWASKVNCQ GSSGVAGLEE EKERKRKGNE VDEFDEGSID  300
GSGLHYDSDD FAGENAKVEE NAGNVGGGGG NSSSADVMAA DKGKKKGLPA KNLMAERRRR  360
KKLNDRLYML RSVVPKISKM DRASILGDAI EYLRELLQRI NDLQNELEST PSSSSLPTTN  420
ATSLHPSTPT LPTLPCRLKD ELEHCSSSLP SPNSQPARVV EVKMREGRAV DIHMFCARRP  480
GLLLSALRSL DSLGLDIQQA VISCFNGFAL DIFRAEQCRD PCVLPEEIKA VLLHSAGLLN  540
TM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	344	362	KKKGLPAKNLMAERRRRKK
2	356	363	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-73	bHLH family protein