PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW26811.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 224aa    MW: 25101.2 Da    PI: 10.1353
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW26811.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.21.6e-31147197151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                 krienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gklyeys+
  RWW26811.1 147 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLYEYST 197
                 79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MVTEIMFNKI NGFHLPPSQE KDRTAEKKSE LRASGKVGLL QKPGFDPYDD TRVIALCRST  60
HRHPLTAALP PITGRQRGLP DTAPVFYKTA FLSPHRNCLL SHPSPLLLLF FSFPIVSFFV  120
CCFASEIVVG GTTGSGDAMG RGRVQLKRIE NKINRQVTFS KRRSGLLKKA HEISVLCDAE  180
VALIVFSTKG KLYEYSTDSR CARFFYLPIL LHDLDWATLS ARFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.14e-36MIKC_MADS family protein