PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW26865.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

SBP

Protein Properties

Length: 787aa MW: 87837.2 Da PI: 7.1274

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW26865.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.7	5.2e-41	150	227	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+adls+ k+yhrrhkvCe+h+ka++++v++ qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+q+ RWW26865.1 150 ACQVEGCDADLSDSKDYHRRHKVCEMHAKASSAVVRNAIQRFCQQCSRFHLLEEFDEGKRSCRRRLAGHNRRRRKTQP 227 5**************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 787 aa Download sequence
MEARRGGENH QFIAAGTSKL NRTGKKSLEW DLNDWRWDGD LFVASPLNSI PEDFRNKQLH 60 QDAAKVLVSN CSSSSSEGAD FELVDKEKGE AEKRRRIVVG EEDVSIGGAG SPPLKLGAHA 120 YPVVEADLAI LEGKTGKKSF PLGGNSSHPA CQVEGCDADL SDSKDYHRRH KVCEMHAKAS 180 SAVVRNAIQR FCQQCSRFHL LEEFDEGKRS CRRRLAGHNR RRRKTQPDVN VNVNGNSLID 240 EQACGYLLIS LLRILSNLQC NCCNLFIEYL QHVSLHAANS DQSHDQELLT NFLGNLATFA 300 NSFDSSGLSR LLPASQDPQK LATSSGISTD VVITSVPNGV REQESGNPLC STAVMTCITG 360 TQDPLRQTDH VTSILDWLSS GPTDIESYIR PGCIVLTIYL RQAESAWVQF EDCGLCNGFF 420 PFIVAEEDVC SEIRILENAI NVASCVGQLQ ERTDAANARN QALDFINELG WLLRRNHMRS 480 ASEETKFSQN TFTMRRFRRL MSFAMSREWS AVVKKLLDIL FSGTVNADRQ SPTELALSEN 540 LLHSAVQMNS RPMVELLLRY VPVKASKETD LDHFLFRPDM LGPLGITPLH IAASSNGAES 600 IVDALTDDRE LVLIISCLFS LYFTFLFGRL SYPLLVSAFQ LGIKAWKKIR DCNGFTPEDY 660 ALAQGHDSYV RLVQKKIDKQ HHLSQVVLNI PGVVSYELVD ALKSAKPNLF QITKSCLSRQ 720 QPYCHRCSQK LAYPNSVART MLYRPVMLAL VGIAAVCVCM GLLFKTPPQV FYVFPSFRWE 780 LLDYGFM

Sequence ? help Back to Top

Protein Sequence Length: 787 aa Download sequence

MEARRGGENH QFIAAGTSKL NRTGKKSLEW DLNDWRWDGD LFVASPLNSI PEDFRNKQLH  60
QDAAKVLVSN CSSSSSEGAD FELVDKEKGE AEKRRRIVVG EEDVSIGGAG SPPLKLGAHA  120
YPVVEADLAI LEGKTGKKSF PLGGNSSHPA CQVEGCDADL SDSKDYHRRH KVCEMHAKAS  180
SAVVRNAIQR FCQQCSRFHL LEEFDEGKRS CRRRLAGHNR RRRKTQPDVN VNVNGNSLID  240
EQACGYLLIS LLRILSNLQC NCCNLFIEYL QHVSLHAANS DQSHDQELLT NFLGNLATFA  300
NSFDSSGLSR LLPASQDPQK LATSSGISTD VVITSVPNGV REQESGNPLC STAVMTCITG  360
TQDPLRQTDH VTSILDWLSS GPTDIESYIR PGCIVLTIYL RQAESAWVQF EDCGLCNGFF  420
PFIVAEEDVC SEIRILENAI NVASCVGQLQ ERTDAANARN QALDFINELG WLLRRNHMRS  480
ASEETKFSQN TFTMRRFRRL MSFAMSREWS AVVKKLLDIL FSGTVNADRQ SPTELALSEN  540
LLHSAVQMNS RPMVELLLRY VPVKASKETD LDHFLFRPDM LGPLGITPLH IAASSNGAES  600
IVDALTDDRE LVLIISCLFS LYFTFLFGRL SYPLLVSAFQ LGIKAWKKIR DCNGFTPEDY  660
ALAQGHDSYV RLVQKKIDKQ HHLSQVVLNI PGVVSYELVD ALKSAKPNLF QITKSCLSRQ  720
QPYCHRCSQK LAYPNSVART MLYRPVMLAL VGIAAVCVCM GLLFKTPPQV FYVFPSFRWE  780
LLDYGFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	93	97	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	7e-85	SBP family protein