PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW26960.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GRAS
Protein Properties Length: 402aa    MW: 45072.7 Da    PI: 5.0513
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW26960.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS309.95.7e-95313983374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 el+ ecA+a++++d +++++lL+ l+elasp+gd  q+la+yf+eAL  r ++ ++ +y +l++ ++++++ +++  ++  f+evsP+ +f+h++ N a
  RWW26960.1  31 ELIQECAKAIAEKDSSKIHHLLWMLNELASPYGDCDQKLASYFLEALLCRATEAGELCYTTLTSAAEKRHSFVTARRVMLKFQEVSPWTTFGHVASNGA 129
                 67889*********************************************************9999997777777777777****************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrledleleeLrvkpg 199
                 I+ea+ege+++Hi+D++ ++++QWp+Ll+aLasR +++p+lR+T+v+   s     + e+g+r+ kfA+ +gvpfef+v+ ++++l +l+ eeL ++++
  RWW26960.1 130 IMEAMEGESKLHIVDISNTYCTQWPTLLEALASRGSDTPHLRLTVVAM-VSMGGSVMDEIGRRMVKFARLMGVPFEFHVVsIVSTLGQLTEEELGLRKD 227
                 ***********************************************9.667999*************************8899*************** PP

        GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 Ea+aVn+v +l r+      +e+ rd++++++  l+P+vv+vve+ead   +++++++ f +++++ys ++ +le++++++s+er ++E+e  +r+i  
  RWW26960.1 228 EAVAVNCVGALRRVS-----VEE-RDAFMRMLCALRPRVVTVVEEEADFttSRGDLVACFEQCVRFYSIFLGMLEESFSPTSNERFMLEKE-CSRSILG 319
                 *************97.....555.99********************998545669************************************.89***** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSaWr 374
                 v+ac+g+   er+e++++W erl+ea F + ++++++  + ++ll+++  +g+++     + + l+l+Wk +p+v++SaW+
  RWW26960.1 320 VLACNGSGVCERREKASQWCERLTEA-FATTAFNDDVIGDLEALLERYR-EGWSLVpakGDAAGLYLTWKAEPVVWASAWK 398
                 ************************98.*********************9.8877764436678899**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    
MQNTDPYHRH PSISCLLEPK DPREEEKWAA ELIQECAKAI AEKDSSKIHH LLWMLNELAS  60
PYGDCDQKLA SYFLEALLCR ATEAGELCYT TLTSAAEKRH SFVTARRVML KFQEVSPWTT  120
FGHVASNGAI MEAMEGESKL HIVDISNTYC TQWPTLLEAL ASRGSDTPHL RLTVVAMVSM  180
GGSVMDEIGR RMVKFARLMG VPFEFHVVSI VSTLGQLTEE ELGLRKDEAV AVNCVGALRR  240
VSVEERDAFM RMLCALRPRV VTVVEEEADF TTSRGDLVAC FEQCVRFYSI FLGMLEESFS  300
PTSNERFMLE KECSRSILGV LACNGSGVCE RREKASQWCE RLTEAFATTA FNDDVIGDLE  360
ALLERYREGW SLVPAKGDAA GLYLTWKAEP VVWASAWKPI KP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-127GRAS family protein