PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW26962.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

FAR1

Protein Properties

Length: 468aa MW: 52158.5 Da PI: 5.6264

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW26962.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51.2	4e-16	97	180	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA vGF v ++k++ ++g++ + Csk gk +++ + r++ +t+C+ak++ k dg ++ ++++eHnH+++ RWW26962.1 97 NFYKAYAMAVGFGVAVQKTSFA-TSGQCRRVIIACSKVGKGKTDACY-----KARQSAKTDCQAKIVAKAAGDGLLHLVEVNNEHNHPVN 180 6*************998887.8889************9999.....9999*****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
DISNDIVIEV PVDDGDDDCG TEVNGEPPED GEPLRGIPSD CGKDSSDNKE VITAEDNADD 60 TEKEVQIELD EDSKGVQGDD LTPRLGMTFK TREEVCNFYK AYAMAVGFGV AVQKTSFATS 120 GQCRRVIIAC SKVGKGKTDA CYKARQSAKT DCQAKIVAKA AGDGLLHLVE VNNEHNHPVN 180 PSTARFLNCY KKMAGSRKQE SVGQSNGQGS SRPDEIECED STKIGRLKLA KGDDEAIFEI 240 PSHYILGRWK KDYKRLHAVD RSLNDMQVDN VVERYDYLTM RCLHLAELGF ISDDRYQVTL 300 KLLKEVEKSL LDDGMCRDRQ PRLLSFGMNS NENVQNLLLA QLGTSEGNKN SNSLQVKRRG 360 RPPKKAKEPN MEMLARPNKE QDFLRSSLVG NEGNILHSNP TPSHLNTQRI DLMEDITTDD 420 LSFGSHFGMH VNHQHHIGNQ PRTQTHNLLQ VCYLVSFQIC VIISVFLT

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

DISNDIVIEV PVDDGDDDCG TEVNGEPPED GEPLRGIPSD CGKDSSDNKE VITAEDNADD  60
TEKEVQIELD EDSKGVQGDD LTPRLGMTFK TREEVCNFYK AYAMAVGFGV AVQKTSFATS  120
GQCRRVIIAC SKVGKGKTDA CYKARQSAKT DCQAKIVAKA AGDGLLHLVE VNNEHNHPVN  180
PSTARFLNCY KKMAGSRKQE SVGQSNGQGS SRPDEIECED STKIGRLKLA KGDDEAIFEI  240
PSHYILGRWK KDYKRLHAVD RSLNDMQVDN VVERYDYLTM RCLHLAELGF ISDDRYQVTL  300
KLLKEVEKSL LDDGMCRDRQ PRLLSFGMNS NENVQNLLLA QLGTSEGNKN SNSLQVKRRG  360
RPPKKAKEPN MEMLARPNKE QDFLRSSLVG NEGNILHSNP TPSHLNTQRI DLMEDITTDD  420
LSFGSHFGMH VNHQHHIGNQ PRTQTHNLLQ VCYLVSFQIC VIISVFLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	6e-08	FAR1 family protein