PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW27008.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family HD-ZIP
Protein Properties Length: 303aa    MW: 34743 Da    PI: 5.4399
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW27008.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.26e-1883136356
                 --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 k++++t+ q++ Le+ Fe ++++  e++ ++Ak lgL+ +q+ vWFqNrRa++k
  RWW27008.1  83 KKRRLTTCQVQFLEKNFELENKLEPERKLQIAKVLGLKPKQIAVWFQNRRARWK 136
                 56689************************************************9 PP
2HD-ZIP_I/II124.45.3e-4083172291
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                  kkrrl++ qv++LE++Fe e+kLeperK ++a+ Lgl+p+q+avWFqnrRAR+ktkq+Ekdye+Lk++ydalk ++++L ke+eeL++e+
   RWW27008.1  83 KKRRLTTCQVQFLEKNFELENKLEPERKLQIAKVLGLKPKQIAVWFQNRRARWKTKQIEKDYESLKSSYDALKMDHDSLVKEKEELEAEV 172
                  9*************************************************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MAGKRHHGSS NMAVLLQSQE MYKEFSGTLF APGTPTGDSL GSWSLTDLQD GHGNSLKRPL  60
FRPVELDEIG DDESCEYPQQ PDKKRRLTTC QVQFLEKNFE LENKLEPERK LQIAKVLGLK  120
PKQIAVWFQN RRARWKTKQI EKDYESLKSS YDALKMDHDS LVKEKEELEA EVLSLTKRLL  180
KEENGSLESF ESKRLPDNLQ NLDSTLAFEV KKLHGQTMLR KQEDISSANS AILDSESPHY  240
AHEGDCSMLM ELNSYSNPFR LNHSDHSQIG DVDNVKHCNF LSPEDTLCGS EFHVAEQVFW  300
LWP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1131139RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.17e-29HD-ZIP family protein