PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW27023.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

SBP

Protein Properties

Length: 343aa MW: 37083.5 Da PI: 7.0451

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW27023.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	135.3	1.9e-42	78	154	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC+adls++keyhrrhkvCe hsk+pvv+v g+eqrfCqqCsrfh l+efDeekrsCr+rL++hn+rrrk+q+ RWW27023.1 78 CLVDGCRADLSSCKEYHRRHKVCELHSKTPVVVVGGVEQRFCQQCSRFHLLTEFDEEKRSCRKRLDGHNRRRRKPQS 154 **************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MEWDPKLPSW GLAELEQTAE AKTGAMAGPS CSVDLKLGGG SGDAGPPEQW RDQPRSTMAC 60 SPSKRARAPS MASQTASCLV DGCRADLSSC KEYHRRHKVC ELHSKTPVVV VGGVEQRFCQ 120 QCSRFHLLTE FDEEKRSCRK RLDGHNRRRR KPQSESINSP TLLPLYQGTR FSTYPHVSQI 180 LPTQPSWAGI IKTEEDALYT HGHRCFPPGS FSNIYKQGKA AYGRTAMETA VSAAESSSSR 240 VFSDGLTQVL DSGCALSLLS SPTRTSTINV GQMLPAGVVA VGEPLVSSLE YSGFSCSGVE 300 DERTGGGVLI SDADADLHCQ DIFHVGGEGS SDVASHRLPF SWQ

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MEWDPKLPSW GLAELEQTAE AKTGAMAGPS CSVDLKLGGG SGDAGPPEQW RDQPRSTMAC  60
SPSKRARAPS MASQTASCLV DGCRADLSSC KEYHRRHKVC ELHSKTPVVV VGGVEQRFCQ  120
QCSRFHLLTE FDEEKRSCRK RLDGHNRRRR KPQSESINSP TLLPLYQGTR FSTYPHVSQI  180
LPTQPSWAGI IKTEEDALYT HGHRCFPPGS FSNIYKQGKA AYGRTAMETA VSAAESSSSR  240
VFSDGLTQVL DSGCALSLLS SPTRTSTINV GQMLPAGVVA VGEPLVSSLE YSGFSCSGVE  300
DERTGGGVLI SDADADLHCQ DIFHVGGEGS SDVASHRLPF SWQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	135	152	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	6e-48	SBP family protein