PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW27084.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HB-other

Protein Properties

Length: 407aa MW: 44904.7 Da PI: 10.9395

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW27084.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	51.1	2.4e-16	213	266	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 kR +++q+++Lee+++ +++ps+ ++++LA+++gL+ +qV++WF NrR +k RWW27084.1 213 KRLMKSPSQVQILEEAYAVESNPSTMMKADLARRTGLEYTQVQYWFGNRRFLDK 266 688889********************************************8666 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MGRHIAGRDK ATAAAGRSKL LEVPLREVDH QASLPRQPYL PPGTGVPQLH TQRPPSTTTS 60 GHSHLPLYFL LLLLFLDRVQ IDPHDLFRPK APGGERRKGR EGKPKAGVAG HKNERKKGLK 120 QEAAAATVEA AKQRSRSLCP SCRRLLLGPW RCFVPLPLSP SSYTNISFTR NQTEPLPIAS 180 LAARRRKRGK RREMEHGEGS SGKRPPAAGL TVKRLMKSPS QVQILEEAYA VESNPSTMMK 240 ADLARRTGLE YTQVQYWFGN RRFLDKHGPR TNTPRIDRHG LLWEFNPDRT SSMSPVTVAR 300 AGPAPNGSVY SVETLPTMRA AGQSTVNPGL VPVLPCVPLT TQSQLLPVSQ ELQWMITHVE 360 NNLGHPLRAD GPILGTEFDA LPAGAFGFRL GIIILTILFE KNESPLY

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MGRHIAGRDK ATAAAGRSKL LEVPLREVDH QASLPRQPYL PPGTGVPQLH TQRPPSTTTS  60
GHSHLPLYFL LLLLFLDRVQ IDPHDLFRPK APGGERRKGR EGKPKAGVAG HKNERKKGLK  120
QEAAAATVEA AKQRSRSLCP SCRRLLLGPW RCFVPLPLSP SSYTNISFTR NQTEPLPIAS  180
LAARRRKRGK RREMEHGEGS SGKRPPAAGL TVKRLMKSPS QVQILEEAYA VESNPSTMMK  240
ADLARRTGLE YTQVQYWFGN RRFLDKHGPR TNTPRIDRHG LLWEFNPDRT SSMSPVTVAR  300
AGPAPNGSVY SVETLPTMRA AGQSTVNPGL VPVLPCVPLT TQSQLLPVSQ ELQWMITHVE  360
NNLGHPLRAD GPILGTEFDA LPAGAFGFRL GIIILTILFE KNESPLY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	185	193	RRKRGKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	1e-17	HB-other family protein