PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW27170.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 104aa MW: 11573.2 Da PI: 4.5815

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW27170.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	46.5	1.1e-14	3	60	43	100
DUF260 43 lkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +++l+++p e+r++a+++++ eA +r++dPvyG+vgvi+ lq++++ ++ ela+++++ RWW27170.1 3 INILQQIPVEQRRHAADAIALEAYWRVQDPVYGSVGVISLLQKEISLAQRELAETQAQ 60 689**************************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 104 aa Download sequence
MCINILQQIP VEQRRHAADA IALEAYWRVQ DPVYGSVGVI SLLQKEISLA QRELAETQAQ 60 VAMYTAQVQS QSNQITQVQY LVDNAHLIPN QPPIPGLCQP PDIP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26660.1	1e-15	LBD family protein