PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW27256.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 327aa MW: 35565.1 Da PI: 6.6009

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW27256.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.5	4.8e-13	124	175	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r+ah ++Er+RR++iN+ ++ Lr+l+P + ++ + a+i+ A++++k L+ RWW27256.1 124 QRMAHIAVERNRRKQINEYLAVLRSLMPAS---FVPRGDQASIVGGAIDFVKRLE 175 79*************************9...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MALEAVVFPQ DLFGCDVREL HTKGGEVWRY DFGGGAEDGK VCGGAGDQGG RGLQQERKVA 60 DVTRGTWDTS SSSIVQASAD GHVNSSSLET GTEDAFIVSP GVAGRRRKRR RLKSLKNQEE 120 VENQRMAHIA VERNRRKQIN EYLAVLRSLM PASFVPRGDQ ASIVGGAIDF VKRLEKLVHS 180 LEVLKTVKQR SSSSPSLFAD FFSFPQYSST SPCCKNSAAD GSAGEPAVEN HSAVVAEVEV 240 TTVETHANLK VLSTRRPKQL QNMVVGLQGL HLTTLHLNVT TIDDMVLYSF SLKVEDECLL 300 TSADEIATAV HQMVAKIQQD AAFDCTV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	104	112	GRRRKRRRL
2	105	111	RRRKRRR
3	107	111	RKRRR
4	108	112	KRRRL
5	125	136	RMAHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	4e-48	bHLH family protein