PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW27603.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HD-ZIP

Protein Properties

Length: 240aa MW: 27523.9 Da PI: 6.2647

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW27603.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.6	1e-18	34	87	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rqV +WFqNrRa++k RWW27603.1 34 KKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 87 456899***********************************************9 PP
2	HD-ZIP_I/II	131.4	3.5e-42	33	123	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqvk+LE+sFe +kLeperK++lar+Lglqprqva+WFqnrRAR+ktkqlEkdy++Lkr+++a+k+ene+L++++++L+ e+ RWW27603.1 33 EKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSENESLQAQNKKLQVEV 123 69*************************************************************************************9776 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MLGKRSMSFS GIEICEEMNA DDDLSDEGMQ TGEKKRRLNM EQVKTLEKSF ELGNKLEPER 60 KMQLARALGL QPRQVAIWFQ NRRARWKTKQ LEKDYDVLKR QFEAMKSENE SLQAQNKKLQ 120 VEVPILSLKR RETSELINLN KETEGSSSNR SENSSEINLD LSRASVTESP LNPNQSLPFF 180 HSVRPADVDH LLLHGSSRPE LQCPKMDHGG IAEGSFSNLL SSMEDQSASF WSWSDQHNFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	82	90	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	7e-70	HD-ZIP family protein