PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW27660.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

NAC

Protein Properties

Length: 381aa MW: 43319.9 Da PI: 7.5294

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW27660.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	114.7	9.7e-36	44	186	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyW 83 lp+G++F+Ptd+elv e+L++kv++++ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ + +W RWW27660.1 44 LPAGVKFDPTDQELV-EHLEAKVKAEDlrshplIDEFIPtIEGDdGICYTHPEKLP-GVRRDGLSKHFFHRPSKAYTTGTRKRRKiqstcdlqRGETRW 140 799**********.99****96665443332223555545******.566677799***************85666555433778 PP NAM 84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l RWW27660.1 141 HKTGKTRPVMV-NGKQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 186 *********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MNTSPKVCTS SLIDAKLVEH RVSVSKQCPG CGHKLDRKPD WVGLPAGVKF DPTDQELVEH 60 LEAKVKAEDL RSHPLIDEFI PTIEGDDGIC YTHPEKLPGV RRDGLSKHFF HRPSKAYTTG 120 TRKRRKIQST CDLQRGETRW HKTGKTRPVM VNGKQKGCKK ILVLYTNFGK HRKPEKTNWV 180 MHQYHLGESE EEKEGELVVS KIFFQTQPRQ CSWSDKNSTT AAATAEGMDQ RRDSGGVSCS 240 SDLVSRRDEH SYSSMEMHQH LMKPDNFSFA PFRESFDEVS MGEEPMARDE HSEHEHLVGS 300 PHHQVAQEQQ QLQQLQVVPT VAFHITTPMN PVSAIVSTHP HHQTSMVLED PYQVSGILLQ 360 TDKFQVRQCN LERPTVYLVG N

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MNTSPKVCTS SLIDAKLVEH RVSVSKQCPG CGHKLDRKPD WVGLPAGVKF DPTDQELVEH  60
LEAKVKAEDL RSHPLIDEFI PTIEGDDGIC YTHPEKLPGV RRDGLSKHFF HRPSKAYTTG  120
TRKRRKIQST CDLQRGETRW HKTGKTRPVM VNGKQKGCKK ILVLYTNFGK HRKPEKTNWV  180
MHQYHLGESE EEKEGELVVS KIFFQTQPRQ CSWSDKNSTT AAATAEGMDQ RRDSGGVSCS  240
SDLVSRRDEH SYSSMEMHQH LMKPDNFSFA PFRESFDEVS MGEEPMARDE HSEHEHLVGS  300
PHHQVAQEQQ QLQQLQVVPT VAFHITTPMN PVSAIVSTHP HHQTSMVLED PYQVSGILLQ  360
TDKFQVRQCN LERPTVYLVG N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56620.1	1e-99	NAC family protein