![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | RWW27853.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
| Family | ERF | ||||||||
| Protein Properties | Length: 215aa MW: 23328.5 Da PI: 9.7238 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 63.1 | 5.8e-20 | 26 | 75 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+++GVr ++ +gr++AeIrd ++ ++r++lg+f++ae+Aa+a++aa+ +l+g
RWW27853.1 26 RFRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAAIALRG 75
79*******.**********883....5*************************98 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 215 aa Download sequence |
MRKGSAQAVD PLAAAQIGGA MAVEKRFRGV RKRPWGRFAA EIRDPWKKTR VWLGTFDSAE 60 DAARAYDAAA IALRGPKAKT NFPSPPSPFP PAALPAAAAH FPFHRHQQHY PQPPPPQRPT 120 SSSHSSTVES FSGPRLPSAA APIRLRPPIL KRQANPPPPP RVLNGDDDCH SDCGSSSSVI 180 DDDGDVVLMC RPPLPFDLNL LPLPDDDLHD TVLRL |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G50640.1 | 8e-23 | ERF family protein | ||||




