PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW28153.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HD-ZIP

Protein Properties

Length: 309aa MW: 34051.8 Da PI: 9.3563

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW28153.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.5	9.7e-18	163	217	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++t+eq Le+ F+++++++ ++++ LA l+L rqV vWFqNrRa+ k RWW28153.1 163 RKKLRLTREQSALLEDRFREHSTLDPKQKQALAGLLNLRPRQVEVWFQNRRARTK 217 788899***********************************************98 PP
2	HD-ZIP_I/II	114.5	6.4e-37	163	251	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl++eq++lLE+ F+e+++L+p++K++la L+l+prqv+vWFqnrRARtk+k++E++ye+L++++++l++en+rL+ke +eL+ + RWW28153.1 163 RKKLRLTREQSALLEDRFREHSTLDPKQKQALAGLLNLRPRQVEVWFQNRRARTKLKKTEVEYERLRKCCETLRDENRRLQKELQELK-S 251 69*************************************************************************************9.4 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MSACVSSPMP TCSRDNTLPS IAYIMHSLLC SHPAVSGKET PMDMRDRDDV RVAGLSLRLN 60 YDVRGDLSVG DRPRPSAGFK LERSSSTATS VEPFLTLGLP GDGCGSAKAQ AEEDKACSAS 120 RVVGRPSSPH SMASSFSGGY LSRIKREKGA RVSDEEEDGA AARKKLRLTR EQSALLEDRF 180 REHSTLDPKQ KQALAGLLNL RPRQVEVWFQ NRRARTKLKK TEVEYERLRK CCETLRDENR 240 RLQKELQELK SLKLLRPRYM QLPAAAVAGF TMCPSCSTMA AASDSEESGS VVVAPNPRFC 300 NLFAHSASL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	2e-53	HD-ZIP family protein