PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW28258.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 318aa MW: 35135.4 Da PI: 6.6746

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW28258.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	64.3	2.4e-20	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+d+v+++G g+W++I++ g+ R++k+c++rw +yl RWW28258.1 15 KGPWTPEEDRKLIDYVQKHGRGSWHRIPKLAGLSRCGKSCRLRWTNYL 62 79********************************************97 PP
2	Myb_DNA-binding	55.2	1.6e-17	68	117	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++l+v+++ +lG++ W++Ia +++ gRt++++k++w+++l RWW28258.1 68 RGKFTEEEEQLIVHLHSLLGNKyelPWSSIATKLP-GRTDNEIKNYWNTHL 117 89*******************************.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MARSPSHEEM GSVKKGPWTP EEDRKLIDYV QKHGRGSWHR IPKLAGLSRC GKSCRLRWTN 60 YLRPDIKRGK FTEEEEQLIV HLHSLLGNKY ELPWSSIATK LPGRTDNEIK NYWNTHLRKK 120 LMRMGIDPVT HRPTTDLSLL TSISSLLSAG SLGYTTSHLE TALKLQAEAA HLVQSLIQAL 180 TSSSTSNTDL MNVFGSPSHT NYKASDGCLG GSFNLQNSAS VIPYLNKDSQ PVPDFSFCID 240 EGGVTASRTE EGQSTSSLLP SKSTPPFVST SSEADNVDLL MSSESTYANS LSFTPFEGWE 300 NLNLDSLIND LGCKEIPE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	9e-74	MYB family protein