PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW28277.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family HD-ZIP
Protein Properties Length: 311aa    MW: 35239.4 Da    PI: 6.6292
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW28277.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.71.9e-18109162356
                 --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 k++++t eq+++Le+ Fe  +++  e++ +LA+ lg++ rqV +WFqNrRa++k
  RWW28277.1 109 KKRRLTVEQVRTLEKNFELGNKLEPERKMQLARALGMQPRQVAIWFQNRRARWK 162
                 45689************************************************9 PP
2HD-ZIP_I/II130.75.6e-42108199192
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                  ekkrrl+ eqv++LE++Fe  +kLeperK++lar+Lg+qprqva+WFqnrRAR+ktkqlEkdy++Lkr+++a+k+ene+L++++++L++e++
   RWW28277.1 108 EKKRRLTVEQVRTLEKNFELGNKLEPERKMQLARALGMQPRQVAIWFQNRRARWKTKQLEKDYDVLKRHFEAIKSENEALKAHNNQLQAEIM 199
                  69**************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
AGRGMASSFF HHGFMLQMQT PHEEEHQHLT PSPCTNLQDL RGESRVRRDT HPQVLPMELT  60
LSVVVVVVVD AGAASMVGKR SVSFSGMDTC REMSAEEDLS DDGSQAGEKK RRLTVEQVRT  120
LEKNFELGNK LEPERKMQLA RALGMQPRQV AIWFQNRRAR WKTKQLEKDY DVLKRHFEAI  180
KSENEALKAH NNQLQAEIMV LKGRETSDLI NLNKDTEGSC SNKSENSSEI NLDISRQSVD  240
KSPLHPHQSS TFFQPVRPGD MDQLFQSSSR PETQCPKLEN GGGHEGTLSN LLCSMEDQSA  300
FWSWSDHHSF H
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157165RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.12e-90HD-ZIP family protein