PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW28321.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C3H

Protein Properties

Length: 212aa MW: 22196.3 Da PI: 8.8984

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW28321.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	26.7	9.8e-09	16	41	2	27
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 kt+ C+ + Ck+Gd+C+FaHg+ RWW28321.1 16 KTRMCNKYNTADGCKFGDKCHFAHGE 41 89**********************96 PP
2	zf-CCCH	40.1	6.2e-13	179	203	1	26
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 ykt+lC++fa+ G C +GdrC+FaHg RWW28321.1 179 YKTKLCDNFAK-GSCTFGDRCHFAHG 203 9********.***********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MPPSTIPNGL PSSAVKTRMC NKYNTADGCK FGDKCHFAHG EWELGKPIIS SHDGHMAPSM 60 GGRYAANMEP PQPTGLAAAT SFGASATAKI SVDASLAGAI IGKGGMNTKQ ICRITGVKLA 120 IREHESDASL RNIELEGTFD QIKHASSMVR ELIVNVSSAT PLPPKISAAG APNALGGNYK 180 TKLCDNFAKG SCTFGDRCHF AHGASELRKT VP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06770.1	1e-54	C3H family protein