PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW28391.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family HD-ZIP
Protein Properties Length: 271aa    MW: 30575.6 Da    PI: 4.6193
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW28391.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.41.2e-182174356
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                k+++++ eq+++Le+ Fe ++++  e++ +LA+ lgL+ rqV vWFqNrRa++k
  RWW28391.1 21 KKRRLSVEQVRALERSFEVENKLEPERKLRLAQDLGLQPRQVAVWFQNRRARWK 74
                456899***********************************************9 PP
2HD-ZIP_I/II1331.1e-4220112193
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  ekkrrls eqv++LE+sFe e+kLeperK +la++LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++ydal+ + ++L++++e+L ++++e
   RWW28391.1  20 EKKRRLSVEQVRALERSFEVENKLEPERKLRLAQDLGLQPRQVAVWFQNRRARWKTKQLERDYATLKASYDALRVDYDSLHRDKESLLAQIDE 112
                  69**************************************************************************************99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MDGLEDEDDC SAAAAAAPGE KKRRLSVEQV RALERSFEVE NKLEPERKLR LAQDLGLQPR  60
QVAVWFQNRR ARWKTKQLER DYATLKASYD ALRVDYDSLH RDKESLLAQI DELKAKLTGE  120
ESLSVSSVKE EPMVSEAETK AAASEEEPPA LIYKDGSSDS DSSAVLNDGV LKDYDSRRRG  180
MSSSQDAVPP AAAELGSSTS SVPTSAQLHL APDHHSRPTK GEGFLYHQHH HMLKLEEEEE  240
EEFLGREEPF TSFFSDEQPP TLNWYYPDHW S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16977RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G40060.15e-53HD-ZIP family protein