PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW28545.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 221aa MW: 24353.7 Da PI: 6.3578

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW28545.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	123.5	1.1e-38	10	109	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 aCaaCk++rr+Ca+dC+la fpa+qpk+f n h+lFG+sn+lk++++l++ ++ +am+s++yeA++r rdPv+G++g+i +l+ q+++l+ el+++++ RWW28545.1 10 ACAACKYQRRRCAADCPLAAFFPADQPKQFLNCHRLFGVSNILKIINRLDPPQQAEAMKSIIYEANIRDRDPVHGCLGLICTLHLQIHHLELELEATNT 108 7*********************************************************************************************99988 PP DUF260 100 e 100 + RWW28545.1 109 Q 109 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MTVKGGTNQA CAACKYQRRR CAADCPLAAF FPADQPKQFL NCHRLFGVSN ILKIINRLDP 60 PQQAEAMKSI IYEANIRDRD PVHGCLGLIC TLHLQIHHLE LELEATNTQL LLHRHHQLAA 120 SSSSSSSSTM IDGAATYLLL ENGISIVDSC SIGDNNDINM KAAETFWAHH SSALHAPMDD 180 EISPYFDAID EDGAYESRSN TCPHCLVRLP TIKITILIQT A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	4e-43	LBD family protein