PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW28769.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 373aa MW: 40779.2 Da PI: 9.6646

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW28769.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	55.6	1.4e-17	86	175	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspk...qCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + aLi+a e+ +l+rg+lk+++W+ev++++ ++ g+++ pk qCk++++ l+k+yk +k ++ + +++s++p+f++l+ RWW28769.1 86 CWSDGATSALIDAWGERYLELSRGNLKQKHWQEVADAVtSRDGYTKAPKtdiQCKNRIDTLKKKYKIEKSKISSSAGGATSSWPFFHRLD 175 7***********************************878899886654449*****************999*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MEDDDDAQSP SRSLSQSPSP PPVSVVPASS SPSASPHQLN GHVDEPVTVA AAPHHALPIQ 60 QLRASPGPAS GGRGGGGGSG GGREDCWSDG ATSALIDAWG ERYLELSRGN LKQKHWQEVA 120 DAVTSRDGYT KAPKTDIQCK NRIDTLKKKY KIEKSKISSS AGGATSSWPF FHRLDLLLGP 180 THKTAPPPPS STIPTGVPFR YPQRIPQRLR SNHPAFRKKA RSLPALASKS AGSSADSSDG 240 FPPPPPKAAN GKGLHQEPVE EEGEEQRTAD LRELAQAILK FGEVYERVES SKLRQAMEME 300 KQRMEFTREL ELQRMEFLMK TQMELSQLRS HHHGNSRKRK FDDAGGSSNH HHRHHYRNHD 360 DNSSNSNISG NNG

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MEDDDDAQSP SRSLSQSPSP PPVSVVPASS SPSASPHQLN GHVDEPVTVA AAPHHALPIQ  60
QLRASPGPAS GGRGGGGGSG GGREDCWSDG ATSALIDAWG ERYLELSRGN LKQKHWQEVA  120
DAVTSRDGYT KAPKTDIQCK NRIDTLKKKY KIEKSKISSS AGGATSSWPF FHRLDLLLGP  180
THKTAPPPPS STIPTGVPFR YPQRIPQRLR SNHPAFRKKA RSLPALASKS AGSSADSSDG  240
FPPPPPKAAN GKGLHQEPVE EEGEEQRTAD LRELAQAILK FGEVYERVES SKLRQAMEME  300
KQRMEFTREL ELQRMEFLMK TQMELSQLRS HHHGNSRKRK FDDAGGSSNH HHRHHYRNHD  360
DNSSNSNISG NNG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	71	78	GGRGGGGG
2	73	83	RGGGGGSGGGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14180.1	1e-35	Trihelix family protein