PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW28802.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 203aa    MW: 22605.9 Da    PI: 11.0372
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW28802.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF85.23.9e-271161151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krie+ + rqv fskRr g++KKA+ELSvLCdaev +++fs+ gklye+ss
  RWW28802.1 11 KRIEDRTSRQVRFSKRRSGLFKKAYELSVLCDAEVGLLVFSPAGKLYEFSS 61
                79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MAPRRGKVEL KRIEDRTSRQ VRFSKRRSGL FKKAYELSVL CDAEVGLLVF SPAGKLYEFS  60
SVSRYSSLPS RTSAFQTNAG AGYRRHADAT LTSVGEDGNL TSEDAGGHRR GQTKPCVALM  120
RLPSGPRVAG VSKTFPPRLS HLFHSWSNTT LSPPTILARP AKRDVHAPGC CFFFFFPPWA  180
PSRVLDCVDG FRSFSFSLWT QRM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11880.13e-25MIKC_MADS family protein