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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWW28897.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | ERF | ||||||||
| Protein Properties | Length: 257aa MW: 27448.5 Da PI: 6.7111 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 23.3 | 1.6e-07 | 102 | 129 | 28 | 55 |
AP2 28 rkrfslgkfgtaeeAakaaiaarkkleg 55
r r++lg++ ++e+Aa+a +aa+ +l+g
RWW28897.1 102 RERIWLGSYESPEKAARAFDAAAVCLRG 129
38************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 257 aa Download sequence |
MGSVAFNRCG LHTQSGHLRL WSPSARIPSS SGDWSIRGVQ LSHSSRHCLL RPLSSLQRTC 60 RSLVTLKGSP VEAPGEPLSG PNHLRRGTPA SPSEKGERSG DRERIWLGSY ESPEKAARAF 120 DAAAVCLRGR RARLNFPDSP PPRITAGAQP LTHQQIQAAA ARHAAAAPGP AQPPTPVDSP 180 AASSPASDEF TAGSDDALDW SFMDPQMGAP LTFDGYFPAP LDDFMYDFSS SVPATPLDVA 240 DDHCGIDFGS NSFLWSF |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G19210.1 | 3e-17 | ERF family protein | ||||




