PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW29133.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 182aa    MW: 20381.9 Da    PI: 6.3685
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW29133.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF31.13.1e-10243345
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                i+ ks+rq+tfskRr+g+  KA+ L+   + + a+i +ss g+
  RWW29133.1  2 IDKKSRRQITFSKRRKGLYRKASYLCS-QGYDMAIIAMSSVGN 43
                899*******************87764.367888888887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MIDKKSRRQI TFSKRRKGLY RKASYLCSQG YDMAIIAMSS VGNAFAFGNP DIDAVIRRYE  60
RDGHPIDSDK EEEEEEQGGE VAAVVPPATT LGVLHGSGPT LDLVTTPKAG EEGASSSRMI  120
GEETATKASM LEDHRFWWNK SFDHLRVEEL RDLEKAMVEL RNKAQERADH ILRSTTLSLG  180
RL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.15e-15M-type_MADS family protein