PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW29347.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 388aa    MW: 42900.6 Da    PI: 10.2756
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW29347.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.92.7e-06204226426
                 ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                 ++C++f+r+G C+ Gd C  aHg
  RWW29347.1 204 SPCSDFRRGGGCRLGDACDLAHG 226
                 79****************88887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MGPRSSSVGP DHQPPSTSAL PPPISRPVDT RPLVFHQPPL KSNRRPSPRP SIDLNFKKPR  60
PLRLHGLRTK RLGRSSRVRP LRAPPYRNRT THPMAPGERA LRHPMVHVPP WPVTEHPMAG  120
MQQFDTLPVS NVVGLSAMQH FLHGNSDDLD LAADEYAFDE FRMYEFKVRR CPRGRVHDWT  180
ECPYAHPGEK ARRRDPRRFH YSGSPCSDFR RGGGCRLGDA CDLAHGVFET WLHPARYRTQ  240
PCKDGTACSR RVCFFAHSPE QLRIVLPPSP TSPGKSGVNM FSSPTSTLAL LTPLSDGSPP  300
LSPVGVDDVS AAMRNLQLSK VRSALPFGTR SGFASPASLE SDPATRGRRA AAAVADQSAT  360
QLLEDGWRQE EAAEPGPDLA WVSELVKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29190.11e-69C3H family protein