PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW29543.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HD-ZIP

Protein Properties

Length: 180aa MW: 20678.5 Da PI: 7.3534

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW29543.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.9	4.7e-20	89	142	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++++eq+++Le+ Fe+ ++++ae++ eLA lgL+ rqV vWFqNrRa++k RWW29543.1 89 KKRRLNSEQVRTLERNFEMGNKLDAERKMELAGALGLQPRQVAVWFQNRRARWK 142 45689************************************************9 PP
2	HD-ZIP_I/II	119.6	1.7e-38	88	178	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl++eqv++LE++Fe+ +kL+ erK+ela +LglqprqvavWFqnrRAR+k kqlEkd++ Lkr+++ +k+ene+L++ +++L +e+ RWW29543.1 88 EKKRRLNSEQVRTLERNFEMGNKLDAERKMELAGALGLQPRQVAVWFQNRRARWKIKQLEKDHDELKRQLEIMKTENEALQTRNKKLLSEV 178 69*************************************************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MACNRMPLFF PANLVLQTAH EENQQQQPQT STPPVLPTDP PRFGGEKQPY LASCGMGNRS 60 IAFSRVEACE EMNVEEDLSD DALQPSGEKK RRLNSEQVRT LERNFEMGNK LDAERKMELA 120 GALGLQPRQV AVWFQNRRAR WKIKQLEKDH DELKRQLEIM KTENEALQTR NKKLLSEVGT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	137	145	RRARWKIKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	3e-55	HD-ZIP family protein