PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW29627.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 351aa MW: 38682.1 Da PI: 8.8635

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW29627.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.5	1.1e-16	74	119	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l ++v q+G+ +W++Ia+++ gR++k+c++rw++ RWW29627.1 74 RGHWRPVEDARLRQLVSQYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 119 899***************************.*********996 PP
2	Myb_DNA-binding	56.2	8.1e-18	126	169	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+++l+ a++++G++ W++Iar ++ gRt++ +k++w+ RWW29627.1 126 RRAFSEEEEKRLLAAHRLYGNK-WALIARLFP-GRTDNAVKNHWHV 169 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MASNELKATA DMGFFPPPLP PFPGALGSPF GERECKGVEQ GWGFQVSRWG QKEHHGGEVD 60 GGNSSVQHHK LCARGHWRPV EDARLRQLVS QYGPQNWNLI AEKLEGRSGK SCRLRWFNQL 120 DPRINRRAFS EEEEKRLLAA HRLYGNKWAL IARLFPGRTD NAVKNHWHVI MARKQREQSN 180 GYRKRKPPTS SSLSSPPPEV VNSTSHGSCS CDSTIISTKD ESVSTCTTDL SLNSFSTITS 240 MVGPSSLSRH NPPYQTHLHD LANGYGEKGL SAGNQCHQKS DDPGSGFLPN GGAPIRWFPG 300 FDQSGSSANP EISAKETVGY HMSKAWLQGE TTFGRDNISL PFIDFLGVGA T

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MASNELKATA DMGFFPPPLP PFPGALGSPF GERECKGVEQ GWGFQVSRWG QKEHHGGEVD  60
GGNSSVQHHK LCARGHWRPV EDARLRQLVS QYGPQNWNLI AEKLEGRSGK SCRLRWFNQL  120
DPRINRRAFS EEEEKRLLAA HRLYGNKWAL IARLFPGRTD NAVKNHWHVI MARKQREQSN  180
GYRKRKPPTS SSLSSPPPEV VNSTSHGSCS CDSTIISTKD ESVSTCTTDL SLNSFSTITS  240
MVGPSSLSRH NPPYQTHLHD LANGYGEKGL SAGNQCHQKS DDPGSGFLPN GGAPIRWFPG  300
FDQSGSSANP EISAKETVGY HMSKAWLQGE TTFGRDNISL PFIDFLGVGA T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	2e-69	MYB family protein