PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW29664.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 271aa MW: 30448.2 Da PI: 5.9182

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW29664.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.9	1.5e-15	5	52	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEde l+ v++ G g+W+t +++ g+ R++k+c++rw +yl RWW29664.1 5 RGPWTREEDEVLASFVRREGEGRWRTLPKRAGLLRCGKSCRLRWVNYL 52 89****************************99**********97 PP
2	Myb_DNA-binding	53	7.9e-17	58	103	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l RWW29664.1 58 RGPITPDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 103 8999****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MGMTRGPWTR EEDEVLASFV RREGEGRWRT LPKRAGLLRC GKSCRLRWVN YLRPSIKRGP 60 ITPDEEDLIL RLHRLLGNRW SLIAGRIPGR TDNEIKNYWN THLRKKLIKQ GVDPRTHKPL 120 PSSTDRGSPA QLVPCHPATD RDSMPQEMGT GSCEAIAIRN DRCGYFHGLS PRHDDVGRQN 180 CDVFTTDGDL MPACYGVEDG GKGTDGWTDG VFSALFASFF NEDMFNTNCS QDGDTNEGDC 240 NMTAQVEMID PMDTGLDLEG LLEDRCLHFS G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	1e-76	MYB family protein